Roseburia
| Roseburia | |
|---|---|
Scientific classification 
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| Domain: | Bacteria |
| Phylum: | Bacillota |
| Class: | Clostridia |
| Order: | Lachnospirales |
| Family: | Lachnospiraceae |
| Genus: | Roseburia Stanton & Savage 1983 |
| Type species | |
| Roseburia cecicola[1] Stanton & Savage 1983
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| Species | |
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See text | |
Roseburia is a genus of butyrate-producing, Gram-positive anaerobic bacteria that inhabit the human colon. Named in honor of Theodor Rosebury, they are members of the phylum Bacillota (formerly known as Firmicutes).[2][3]
Increased abundance of Roseburia is associated with weight loss and reduced glucose intolerance in mice.[4]
Phylogeny
[edit]The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[1] and National Center for Biotechnology Information (NCBI)[5]
| 16S rRNA based LTP_10_2024[6][7][8] | 120 marker proteins based GTDB 09-RS220[9][10][11] | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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See also
[edit]References
[edit]- ^ a b A.C. Parte; et al. "Roseburia". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved 2022-09-09.
- ^ Scott, K. P.; Martin, J. C.; Mrazek, J.; Flint, H. J. (2 May 2008). "Transfer of Conjugative Elements from Rumen and Human Firmicutes Bacteria to Roseburia inulinivorans". Applied and Environmental Microbiology. 74 (12): 3915–3917. Bibcode:2008ApEnM..74.3915S. doi:10.1128/AEM.02807-07. PMC 2446557. PMID 18456856.
- ^ Machiels, K; Joossens, M; Sabino, J; De Preter, V; Arijs, I; Eeckhaut, V; Ballet, V; Claes, K; Van Immerseel, F; Verbeke, K; Ferrante, M; Verhaegen, J; Rutgeerts, P; Vermeire, S (August 2014). "A decrease of the butyrate-producing species Roseburia hominis and Faecalibacterium prausnitzii defines dysbiosis in patients with ulcerative colitis". Gut. 63 (8): 1275–83. doi:10.1136/gutjnl-2013-304833. PMID 24021287. S2CID 32963595.
- ^ Ryan, KK; Tremaroli, V; Clemmensen, C; Kovatcheva-Datchary, P; Myronovych, A; Karns, R; Wilson-Pérez, HE; Sandoval, DA; Kohli, R; Bäckhed, F; Seeley, RJ (2014). "FXR is a molecular target for the effects of vertical sleeve gastrectomy". Nature. 509 (7499): 183–8. Bibcode:2014Natur.509..183R. doi:10.1038/nature13135. PMC 4016120. PMID 24670636.
- ^ Sayers; et al. "Roseburia". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2022-09-09.
- ^ "The LTP". Retrieved 10 December 2024.
- ^ "LTP_all tree in newick format". Retrieved 10 December 2024.
- ^ "LTP_10_2024 Release Notes" (PDF). Retrieved 10 December 2024.
- ^ "GTDB release 09-RS220". Genome Taxonomy Database. Retrieved 10 May 2024.
- ^ "bac120_r220.sp_labels". Genome Taxonomy Database. Retrieved 10 May 2024.
- ^ "Taxon History". Genome Taxonomy Database. Retrieved 10 May 2024.